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Cofit
Protein
Homologs
Top cofit genes for Psyr_1054 from
Pseudomonas syringae pv. syringae B728a
alginate biosynthesis protein AlgJ
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1055
Membrane bound O-acyl transferase, MBOAT
0.74
0.84
2
Psyr
_0219
phosphomannomutase
0.34
0.79
3
Psyr
_1060
Sel1-like repeat protein
0.80
0.79
4
Psyr
_1395
virulence
0.78
0.76
5
Psyr
_1062
alginate biosynthesis protein Alg8
0.79
0.76
6
Psyr
_1053
alginate biosynthesis protein AlgF
0.69
0.75
7
Psyr
_1057
alginate biosynthesis protein AlgX
0.75
0.74
8
Psyr
_0915
NAD-dependent epimerase/dehydratase
0.62
0.74
9
Psyr
_0508
lyase, putative
0.63
0.73
10
Psyr
_4130
Peptidase S1, chymotrypsin:PDZ/DHR/GLGF
0.22
0.73
11
Psyr
_1059
alginate export porin
0.78
0.72
12
Psyr
_1058
Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis
0.40
0.71
13
Psyr
_3141
type II and III secretion system protein:NolW-like protein
0.69
0.69
14
Psyr
_0758
beta-fructofuranosidase
0.71
0.68
15
Psyr
_3958
RNA polymerase, sigma-24 subunit, RpoE
0.67
0.67
16
Psyr
_4919
type III effector protein AvrPto1
no
0.65
17
Psyr
_1061
alginate biosynthesis protein Alg44
0.40
0.65
18
Psyr
_0378
Glycosyl transferase, family 2
no
0.65
19
Psyr
_1218
type III helper protein HrpK1
0.66
0.65
20
Psyr
_1056
Poly(beta-D-mannuronate) lyase
0.66
0.64
Or look for
negative cofitness