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  • Top cofit genes for Psyr_1049 from Pseudomonas syringae pv. syringae B728a

    Short-chain dehydrogenase/reductase SDR
    SEED: Oxidoreductase, short chain dehydrogenase/reductase family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4692 ABC transporter no 0.39
    2 Psyr_2526 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein 0.12 0.39
    3 Psyr_5067 conserved hypothetical protein no 0.38
    4 Psyr_3822 Protein of unknown function DUF6 0.47 0.37
    5 Psyr_4681 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region no 0.37
    6 Psyr_4403 conserved hypothetical protein no 0.37
    7 Psyr_4628 Protein of unknown function DUF525 0.15 0.36
    8 Psyr_1044 transcriptional regulator, LysR family no 0.36
    9 Psyr_3299 two component transcriptional regulator, LuxR family no 0.36
    10 Psyr_2124 Benzoate transport no 0.36
    11 Psyr_3146 general secretion pathway protein J, putative no 0.36
    12 Psyr_0754 Levansucrase no 0.36
    13 Psyr_4158 conserved hypothetical protein no 0.35
    14 Psyr_0234 transcriptional regulator, AsnC family no 0.35
    15 Psyr_3055 Aminoglycoside phosphotransferase no 0.35
    16 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.36 0.35
    17 Psyr_3428 CheW-like protein 0.29 0.35
    18 Psyr_3457 Flagellar FliF M-ring protein 0.44 0.35
    19 Psyr_3607 transcriptional regulator, LysR family no 0.35
    20 Psyr_4441 heat shock protein YegD no 0.35

    Or look for negative cofitness