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  • Top cofit genes for Psyr_1039 from Pseudomonas syringae pv. syringae B728a

    FecR protein
    SEED: Iron siderophore sensor protein
    KEGG: transmembrane sensor

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1263 ATPase no 0.44
    2 Psyr_1312 transcriptional regulator, TetR family no 0.44
    3 Psyr_2676 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal no 0.36
    4 Psyr_4394 type II secretion system protein no 0.34
    5 Psyr_2904 Binding-protein-dependent transport systems inner membrane component no 0.33
    6 Psyr_0699 CDS no 0.33
    7 Psyr_4393 type II secretion system protein E no 0.32
    8 Psyr_2935 conserved hypothetical protein no 0.32
    9 Psyr_3665 conserved hypothetical protein no 0.32
    10 Psyr_3060 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.32
    11 Psyr_2666 NUDIX hydrolase no 0.32
    12 Psyr_1322 Protein of unknown function DUF72 no 0.31
    13 Psyr_2999 LmbE-like protein no 0.31
    14 Psyr_2520 SOS-response transcriptional repressor, LexA no 0.30
    15 Psyr_0222 DNA replication and repair protein RadC no 0.30
    16 Psyr_0462 Hydroxypyruvate isomerase 0.26 0.29
    17 Psyr_4372 aspartate carbamoyltransferase no 0.29
    18 Psyr_2508 transcriptional regulator, IclR family 0.28 0.29
    19 Psyr_0586 YD repeat protein no 0.29
    20 Psyr_0166 hypothetical protein no 0.28

    Or look for negative cofitness