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  • Top cofit genes for Psyr_1027 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Protein sirB1

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3716 Response regulator receiver:Transcriptional regulatory protein, C-terminal no 0.36
    2 Psyr_3095 transport system permease protein no 0.36
    3 Psyr_1127 Heavy metal response regulator no 0.34
    4 Psyr_1090 DNA polymerase III, chi subunit no 0.33
    5 Psyr_1561 NAD-dependent malic enzyme no 0.33
    6 Psyr_2298 Glycoside hydrolase, family 15 no 0.32
    7 Psyr_4593 sigma factor domain protein 0.16 0.32
    8 Psyr_1816 transcriptional regulator, GntR family no 0.32
    9 Psyr_2672 Citrate transporter no 0.31
    10 Psyr_1681 Major facilitator superfamily no 0.31
    11 Psyr_3093 conserved hypothetical protein 0.31 0.30
    12 Psyr_3880 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal 0.34 0.30
    13 Psyr_0873 GCN5-related N-acetyltransferase no 0.30
    14 Psyr_1152 transcriptional regulator, ArsR family no 0.30
    15 Psyr_0822 1-phosphofructokinase no 0.30
    16 Psyr_4763 Peptidase C56, PfpI no 0.30
    17 Psyr_1105 TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor 0.30 0.30
    18 Psyr_1184 type III helper protein HrpW1 no 0.30
    19 Psyr_2571 monosaccharide ABC transporter ATP-binding protein, CUT2 family no 0.30
    20 Psyr_2793 hypothetical protein 0.35 0.29

    Or look for negative cofitness