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  • Top cofit genes for Psyr_0916 from Pseudomonas syringae pv. syringae B728a

    GDP-mannose 4,6-dehydratase
    SEED: GDP-mannose 4,6-dehydratase (EC 4.2.1.47)
    KEGG: GDPmannose 4,6-dehydratase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0936 Glycosyl transferase, group 1 0.98 0.91
    2 Psyr_3636 Polysaccharide biosynthesis protein CapD 1.00 0.86
    3 Psyr_3637 Glycosyl transferase, family 4 0.95 0.86
    4 Psyr_0914 Glycosyl transferase, group 1 1.00 0.84
    5 Psyr_0534 membrane protein, putative 0.84 0.82
    6 Psyr_0920 Glycosyl transferase, group 1 0.82 0.79
    7 Psyr_0919 Chromosome segregation ATPase-like protein 0.74 0.77
    8 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) 0.99 0.71
    9 Psyr_0533 conserved hypothetical protein 0.57 0.69
    10 Psyr_4749 cell division protein FtsX 0.72 0.66
    11 Psyr_0531 LmbE-like protein no 0.64
    12 Psyr_0532 conserved hypothetical protein 0.83 0.63
    13 Psyr_0915 NAD-dependent epimerase/dehydratase 0.97 0.62
    14 Psyr_0219 phosphomannomutase 1.00 0.60
    15 Psyr_3324 transcriptional regulator, TetR family 0.24 0.60
    16 Psyr_0529 Glycosyl transferase, group 1 0.77 0.57
    17 Psyr_0626 DedA 0.80 0.57
    18 Psyr_4886 Peptidase M23B 0.44 0.56
    19 Psyr_0923 hypothetical protein no 0.56
    20 Psyr_2146 methionine aminopeptidase, type I 0.56 0.55

    Or look for negative cofitness