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  • Top cofit genes for Psyr_0909 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0764 gluconolactonase no 0.37
    2 Psyr_0615 conserved hypothetical protein no 0.35
    3 Psyr_1457 conserved hypothetical protein no 0.35
    4 Psyr_4952 hypothetical protein no 0.35
    5 Psyr_1294 regulatory protein, LuxR:Response regulator receiver 0.69 0.34
    6 Psyr_2291 Class II aldolase/adducin, N-terminal 0.26 0.33
    7 Psyr_1755 ABC transporter 0.28 0.32
    8 Psyr_3049 Pirin, N-terminal no 0.32
    9 Psyr_1161 transcriptional regulator, GntR family no 0.30
    10 Psyr_4713 Sarcosine oxidase, beta subunit, heterotetrameric no 0.30
    11 Psyr_4336 ribosomal large subunit pseudouridine synthase E no 0.30
    12 Psyr_1601 HAD-superfamily hydrolase, subfamily IB (PSPase-like):HAD-superfamily subfamily IB hydrolase, hypothetical 2 no 0.29
    13 Psyr_1771 Major facilitator superfamily no 0.29
    14 Psyr_1278 Citrate-proton symport 0.28 0.29
    15 Psyr_0498 Protein of unknown function DUF1445 no 0.29
    16 Psyr_2938 transcriptional regulator, LysR family no 0.29
    17 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) 0.33 0.28
    18 Psyr_0299 transcriptional regulator, GntR family no 0.28
    19 Psyr_2173 Electron transfer flavoprotein, alpha subunit no 0.28
    20 Psyr_1881 conserved hypothetical protein no 0.28

    Or look for negative cofitness