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  • Top cofit genes for Psyr_0889 from Pseudomonas syringae pv. syringae B728a

    SpoVT/AbrB-like protein
    SEED: Programmed cell death antitoxin ChpS

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_5074 conserved hypothetical protein no 0.52
    2 Psyr_4922 Short-chain dehydrogenase/reductase SDR no 0.50
    3 Psyr_3008 Undecaprenyl-diphosphatase 0.78 0.47
    4 Psyr_5107 Glycosyl transferase, family 2 no 0.47
    5 Psyr_2892 TonB-dependent receptor:TonB-dependent receptor no 0.46
    6 Psyr_1301 Protein of unknown function DUF533 no 0.46
    7 Psyr_0336 Outer membrane autotransporter barrel 0.46 0.45
    8 Psyr_1975 Integrase, catalytic region no 0.44
    9 Psyr_4926 GCN5-related N-acetyltransferase no 0.43
    10 Psyr_2632 virulence protein SrfB 0.55 0.43
    11 Psyr_2649 hypothetical protein no 0.42
    12 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase no 0.42
    13 Psyr_2665 Phenazine biosynthesis PhzC/PhzF protein no 0.42
    14 Psyr_4889 conserved hypothetical protein no 0.41
    15 Psyr_3536 hypothetical protein no 0.40
    16 Psyr_3748 GCN5-related N-acetyltransferase no 0.40
    17 Psyr_0917 ABC-2 no 0.40
    18 Psyr_3570 L-ornithine ABC transporter membrane protein / L-arginine ABC transporter membrane protein no 0.40
    19 Psyr_1489 hypothetical protein no 0.39
    20 Psyr_2563 HAD-superfamily hydrolase, subfamily IIA 0.20 0.39

    Or look for negative cofitness