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  • Top cofit genes for Psyr_0874 from Pseudomonas syringae pv. syringae B728a

    outer membrane transport energization protein ExbD
    SEED: Biopolymer transport protein ExbD/TolR
    KEGG: biopolymer transport protein ExbD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1868 hypothetical protein no 0.40
    2 Psyr_0566 4Fe-4S cluster binding protein no 0.39
    3 Psyr_0246 aminomethyltransferase no 0.38
    4 Psyr_3080 CDS no 0.38
    5 Psyr_3354 Ankyrin no 0.38
    6 Psyr_4194 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal no 0.37
    7 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein no 0.37
    8 Psyr_0835 transcriptional regulator, TraR/DksA family no 0.37
    9 Psyr_0615 conserved hypothetical protein no 0.36
    10 Psyr_1578 conserved hypothetical protein no 0.36
    11 Psyr_2681 gamma-glutamyltransferase 2, Threonine peptidase, MEROPS family T03 no 0.36
    12 Psyr_2605 transposase, putative no 0.35
    13 Psyr_3773 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.35
    14 Psyr_1722 Amidohydrolase 2 no 0.34
    15 Psyr_1841 Aminotransferase, class I and II no 0.33
    16 Psyr_3124 TonB-dependent siderophore receptor no 0.33
    17 Psyr_1042 Protein of unknown function DUF6 no 0.33
    18 Psyr_2266 Binding-protein-dependent transport systems inner membrane component no 0.33
    19 Psyr_2333 Binding-protein-dependent transport systems inner membrane component no 0.32
    20 Psyr_2945 transcriptional regulator, LysR family no 0.32

    Or look for negative cofitness