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  • Top cofit genes for Psyr_0843 from Pseudomonas syringae pv. syringae B728a

    TPR repeat protein
    SEED: FOG: TPR repeat

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase 0.64 0.51
    2 Psyr_0043 conserved hypothetical protein no 0.49
    3 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein no 0.47
    4 Psyr_4489 putative cytoplasmic protein no 0.45
    5 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family no 0.44
    6 Psyr_0516 ATP-dependent RNA helicase DbpA no 0.43
    7 Psyr_1619 conserved hypothetical protein no 0.42
    8 Psyr_0252 adenylate cyclase no 0.42
    9 Psyr_4117 Stringent starvation protein B no 0.42
    10 Psyr_4237 outer membrane porin no 0.41
    11 Psyr_3187 Alpha/beta hydrolase fold protein no 0.41
    12 Psyr_1258 Peptidase M23B no 0.41
    13 Psyr_3156 transcriptional regulator, LysR family no 0.40
    14 Psyr_4218 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.40
    15 Psyr_1992 Zinc-containing alcohol dehydrogenase superfamily no 0.40
    16 Psyr_2486 diguanylate cyclase/phosphodiesterase no 0.40
    17 Psyr_3460 PAS/PAC sensor signal transduction histidine kinase 0.40 0.40
    18 Psyr_0569 N-acetylmuramoyl-L-alanine amidase 0.64 0.40
    19 Psyr_4156 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 0.33 0.40
    20 Psyr_3121 Protein of unknown function DUF1345 no 0.40

    Or look for negative cofitness