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Cofit
Protein
Homologs
Top cofit genes for Psyr_0843 from
Pseudomonas syringae pv. syringae B728a
TPR repeat protein
SEED: FOG: TPR repeat
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3830
3-oxoacyl-[acyl-carrier protein] synthase
0.64
0.51
2
Psyr
_0043
conserved hypothetical protein
no
0.49
3
Psyr
_0357
Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein
no
0.47
4
Psyr
_4489
putative cytoplasmic protein
no
0.45
5
Psyr
_1074
amino acid ABC transporter membrane protein 2, PAAT family
no
0.44
6
Psyr
_0516
ATP-dependent RNA helicase DbpA
no
0.43
7
Psyr
_1619
conserved hypothetical protein
no
0.42
8
Psyr
_0252
adenylate cyclase
no
0.42
9
Psyr
_4117
Stringent starvation protein B
no
0.42
10
Psyr
_4237
outer membrane porin
no
0.41
11
Psyr
_3187
Alpha/beta hydrolase fold protein
no
0.41
12
Psyr
_1258
Peptidase M23B
no
0.41
13
Psyr
_3156
transcriptional regulator, LysR family
no
0.40
14
Psyr
_4218
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer
no
0.40
15
Psyr
_1992
Zinc-containing alcohol dehydrogenase superfamily
no
0.40
16
Psyr
_2486
diguanylate cyclase/phosphodiesterase
no
0.40
17
Psyr
_3460
PAS/PAC sensor signal transduction histidine kinase
0.40
0.40
18
Psyr
_0569
N-acetylmuramoyl-L-alanine amidase
0.64
0.40
19
Psyr
_4156
microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62
0.33
0.40
20
Psyr
_3121
Protein of unknown function DUF1345
no
0.40
Or look for
negative cofitness