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  • Top cofit genes for Psyr_0799 from Pseudomonas syringae pv. syringae B728a

    Fimbrial protein pilin
    SEED: Type IV pilin PilA
    KEGG: type IV pilus assembly protein PilA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0719 type IV pilus-associated protein, putative no 0.48
    2 Psyr_0717 type IV pilus assembly protein PilW no 0.46
    3 Psyr_0723 Sensor protein PilS 0.56 0.46
    4 Psyr_1654 Type IV pilus assembly PilZ 0.67 0.44
    5 Psyr_4956 protein of unknown function DUF879 no 0.40
    6 Psyr_0992 Protein of unknown function DUF1329 0.40 0.38
    7 Psyr_1792 Amino acid adenylation no 0.37
    8 Psyr_0172 Protein of unknown function DUF785 no 0.37
    9 Psyr_4721 hypothetical protein no 0.37
    10 Psyr_4339 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase no 0.37
    11 Psyr_4519 General substrate transporter:Major facilitator superfamily 0.36 0.37
    12 Psyr_3726 conserved hypothetical protein no 0.37
    13 Psyr_0403 Type IV pilus assembly protein PilM 0.59 0.37
    14 Psyr_0255 glutamate-cysteine ligase 0.38 0.37
    15 Psyr_2579 Aldehyde dehydrogenase no 0.36
    16 Psyr_3820 conserved domain protein no 0.36
    17 Psyr_0720 Fimbrial protein pilin no 0.36
    18 Psyr_3489 FlgN no 0.35
    19 Psyr_3425 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp 0.76 0.35
    20 Psyr_0716 type IV pilus assembly protein PilV 0.42 0.35

    Or look for negative cofitness