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  • Top cofit genes for Psyr_0796 from Pseudomonas syringae pv. syringae B728a

    type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A
    SEED: Leader peptidase (Prepilin peptidase) (EC 3.4.23.43) / N-methyltransferase (EC 2.1.1.-)
    KEGG: leader peptidase (prepilin peptidase) / N-methyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1060 Sel1-like repeat protein 0.59 0.67
    2 Psyr_1058 Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis 0.52 0.67
    3 Psyr_1053 alginate biosynthesis protein AlgF 0.62 0.67
    4 Psyr_1063 GDP-mannose 6-dehydrogenase no 0.66
    5 Psyr_3141 type II and III secretion system protein:NolW-like protein 0.90 0.65
    6 Psyr_0508 lyase, putative 0.67 0.64
    7 Psyr_1062 alginate biosynthesis protein Alg8 0.70 0.64
    8 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.75 0.64
    9 Psyr_1054 alginate biosynthesis protein AlgJ 0.60 0.63
    10 Psyr_1059 alginate export porin 0.52 0.62
    11 Psyr_0219 phosphomannomutase 0.73 0.62
    12 Psyr_0915 NAD-dependent epimerase/dehydratase 0.72 0.60
    13 Psyr_1056 Poly(beta-D-mannuronate) lyase 0.72 0.60
    14 Psyr_1210 type III secretion protein HrcQa 0.52 0.60
    15 Psyr_1206 type III secretion protein HrcT 0.64 0.59
    16 Psyr_1061 alginate biosynthesis protein Alg44 no 0.59
    17 Psyr_1189 SLT:MLTD_N no 0.59
    18 Psyr_0378 Glycosyl transferase, family 2 0.55 0.58
    19 Psyr_1213 type III secretion cytoplasmic ATPase HrcN 0.59 0.58
    20 Psyr_3150 type II secretion system protein 0.81 0.58

    Or look for negative cofitness