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Cofit
Top cofit genes for Psyr_0740 from
Pseudomonas syringae pv. syringae B728a
CDS
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1704
Amino acid adenylation
no
0.43
2
Psyr
_4972
Sel1-like repeat protein
no
0.42
3
Psyr
_2109
methyl-accepting chemotaxis sensory transducer
no
0.40
4
Psyr
_2387
Malate:quinone-oxidoreductase
no
0.38
5
Psyr
_1273
NUDIX hydrolase
no
0.37
6
Psyr
_1527
conserved hypothetical protein
no
0.37
7
Psyr
_3844
conserved hypothetical protein
no
0.37
8
Psyr
_3343
GCN5-related N-acetyltransferase
no
0.37
9
Psyr
_1531
replicative DNA helicase (phage and plasmid)
no
0.37
10
Psyr
_1888
CDS
no
0.36
11
Psyr
_2692
Polysaccharide deacetylase
no
0.36
12
Psyr
_1922
UBA/THIF-type NAD/FAD binding fold protein
no
0.36
13
Psyr
_0766
Protein of unknown function DUF1440
no
0.36
14
Psyr
_2290
TonB-dependent receptor:TonB-dependent receptor
no
0.36
15
Psyr
_4372
aspartate carbamoyltransferase
no
0.36
16
Psyr
_3123
type III effector HopAH2
no
0.36
17
Psyr
_2683
arginine:ornithine antiporter, APA family
no
0.36
18
Psyr
_3653
GGDEF domain protein
no
0.35
19
Psyr
_4666
transcriptional regulator, AsnC family
no
0.35
20
Psyr
_2646
Radical SAM
no
0.35
Or look for
negative cofitness