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Cofit
Top cofit genes for Psyr_0730 from
Pseudomonas syringae pv. syringae B728a
CDS
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1998
lipoprotein, putative
no
0.34
2
Psyr
_2915
transcriptional regulator, AraC family with amidase-like domain protein
no
0.33
3
Psyr
_4076
conserved hypothetical protein
no
0.31
4
Psyr
_3028
Protein of unknown function DUF28
no
0.31
5
Psyr
_2055
Transglutaminase-like protein
no
0.30
6
Psyr
_3210
Protein of unknown function UPF0118
no
0.30
7
Psyr
_0206
conserved hypothetical protein
no
0.30
8
Psyr
_1948
ABC transporter, periplasmic substrate-binding protein, putative
no
0.29
9
Psyr
_3102
transcriptional regulator, LysR family
no
0.29
10
Psyr
_1946
diaminobutyrate aminotransferase apoenzyme
no
0.29
11
Psyr
_2925
Helix-turn-helix motif protein
no
0.29
12
Psyr
_3553
conserved hypothetical protein
no
0.28
13
Psyr
_4915
conserved hypothetical protein
no
0.28
14
Psyr
_4573
Histidine triad (HIT) protein
no
0.28
15
Psyr
_3159
Type I secretion outer membrane protein, TolC
no
0.28
16
Psyr
_1222
CDS
no
0.27
17
Psyr
_2315
methyl-accepting chemotaxis sensory transducer
no
0.27
18
Psyr
_4417
Ferredoxin--nitrite reductase
no
0.27
19
Psyr
_4494
ABC-type phosphate/phosphonate transport system periplasmic component-like protein
no
0.27
20
Psyr
_0970
Phosphoribosyltransferase
no
0.27
Or look for
negative cofitness