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  • Top cofit genes for Psyr_0726 from Pseudomonas syringae pv. syringae B728a

    ribosomal large subunit pseudouridine synthase D
    SEED: Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70)
    KEGG: ribosomal large subunit pseudouridine synthase D

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0034 tryptophan synthase, beta chain 0.51 0.56
    2 Psyr_2780 Phage tail tape measure protein lambda 0.51 0.54
    3 Psyr_2835 hypothetical protein no 0.54
    4 Psyr_0915 NAD-dependent epimerase/dehydratase 0.53 0.53
    5 Psyr_0936 Glycosyl transferase, group 1 0.56 0.52
    6 Psyr_2836 hypothetical protein no 0.52
    7 Psyr_2776 hypothetical protein 0.56 0.52
    8 Psyr_2815 conserved hypothetical protein 0.48 0.51
    9 Psyr_5133 tRNA modification GTPase trmE 0.88 0.51
    10 Psyr_0914 Glycosyl transferase, group 1 0.80 0.51
    11 Psyr_2793 hypothetical protein no 0.51
    12 Psyr_0826 glucose-6-phosphate isomerase 0.83 0.50
    13 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase 0.86 0.48
    14 Psyr_2828 C-5 cytosine-specific DNA methylase 0.58 0.48
    15 Psyr_4739 tRNA (guanine-N(7)-)-methyltransferase 0.82 0.48
    16 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) 0.53 0.47
    17 Psyr_2764 conserved hypothetical protein 0.57 0.47
    18 Psyr_0533 conserved hypothetical protein 0.56 0.46
    19 Psyr_0966 Conserved hypothetical protein YfcH 0.63 0.46
    20 Psyr_0916 GDP-mannose 4,6-dehydratase 0.76 0.46

    Or look for negative cofitness