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  • Top cofit genes for Psyr_0722 from Pseudomonas syringae pv. syringae B728a

    Two-component response regulator PilR
    SEED: Type IV fimbriae expression regulatory protein PilR
    KEGG: two-component system, NtrC family, response regulator PilR

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0505 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region no 0.40
    2 Psyr_0122 NAD(P)H dehydrogenase (quinone) no 0.38
    3 Psyr_2322 YD repeat protein no 0.36
    4 Psyr_2209 ABC transporter, substrate-binding protein, aliphatic sulfonate no 0.34
    5 Psyr_3891 hypothetical protein no 0.34
    6 Psyr_0104 hypothetical protein no 0.33
    7 Psyr_2431 Zinc-containing alcohol dehydrogenase superfamily no 0.33
    8 Psyr_2356 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.33
    9 Psyr_3033 conserved domain protein no 0.33
    10 Psyr_5110 SdiA-regulated no 0.33
    11 Psyr_4675 Peptidase S9, prolyl oligopeptidase active site region 0.39 0.33
    12 Psyr_3410 hypothetical protein no 0.33
    13 Psyr_4980 conserved hypothetical protein no 0.32
    14 Psyr_3685 Silent information regulator protein Sir2 no 0.32
    15 Psyr_2404 NUDIX hydrolase no 0.32
    16 Psyr_0082 Binding-protein-dependent transport systems inner membrane component 0.26 0.32
    17 Psyr_3538 transcriptional regulator, TetR family no 0.32
    18 Psyr_3041 Bacillolysin no 0.31
    19 Psyr_1070 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal 0.37 0.31
    20 Psyr_0113 conserved hypothetical protein no 0.31

    Or look for negative cofitness