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  • Top cofit genes for Psyr_0718 from Pseudomonas syringae pv. syringae B728a

    type IV pilus assembly protein PilX
    SEED: Type IV fimbrial biogenesis protein PilX
    KEGG: type IV pilus assembly protein PilX

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2608 Amino acid adenylation no 0.41
    2 Psyr_0267 Endonuclease/exonuclease/phosphatase no 0.40
    3 Psyr_3141 type II and III secretion system protein:NolW-like protein no 0.40
    4 Psyr_4659 type III effector HopAB1 no 0.39
    5 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A no 0.39
    6 Psyr_0716 type IV pilus assembly protein PilV 0.74 0.39
    7 Psyr_0717 type IV pilus assembly protein PilW 0.69 0.39
    8 Psyr_1060 Sel1-like repeat protein 0.65 0.39
    9 Psyr_2256 ABC transporter no 0.38
    10 Psyr_3993 Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal no 0.38
    11 Psyr_3145 general secretion pathway protein K, putative no 0.38
    12 Psyr_4090 ATP:cob(I)alamin adenosyltransferase 0.46 0.37
    13 Psyr_3554 Carbon storage regulator no 0.37
    14 Psyr_4284 Molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal no 0.36
    15 Psyr_1054 alginate biosynthesis protein AlgJ 0.61 0.36
    16 Psyr_0403 Type IV pilus assembly protein PilM no 0.36
    17 Psyr_0219 phosphomannomutase no 0.36
    18 Psyr_3071 3-isopropylmalate dehydrogenase no 0.36
    19 Psyr_0288 Carbonate dehydratase no 0.35
    20 Psyr_0626 DedA 0.70 0.35

    Or look for negative cofitness