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  • Top cofit genes for Psyr_0716 from Pseudomonas syringae pv. syringae B728a

    type IV pilus assembly protein PilV
    SEED: Type IV fimbrial biogenesis protein PilV
    KEGG: type IV pilus assembly protein PilV

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0719 type IV pilus-associated protein, putative 0.81 0.61
    2 Psyr_3489 FlgN no 0.51
    3 Psyr_0717 type IV pilus assembly protein PilW 0.86 0.51
    4 Psyr_0720 Fimbrial protein pilin 0.75 0.51
    5 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.40 0.45
    6 Psyr_3455 Flagellar assembly protein FliH 0.28 0.44
    7 Psyr_0715 pillin, putative 0.22 0.44
    8 Psyr_3297 CheW protein 0.31 0.44
    9 Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein 0.87 0.43
    10 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.30 0.42
    11 Psyr_0486 TonB, C-terminal 0.33 0.42
    12 Psyr_3440 Flagellar biosynthesis protein FlhA 0.25 0.41
    13 Psyr_1246 TPR repeat protein:TPR repeat protein no 0.40
    14 Psyr_3454 ATPase FliI/YscN 0.33 0.39
    15 Psyr_3447 Flagellar motor switch protein FliM 0.40 0.39
    16 Psyr_3471 Flagellar basal body rod protein:Protein of unknown function DUF1078 0.38 0.39
    17 Psyr_3456 Flagellar motor switch protein FliG 0.66 0.39
    18 Psyr_3442 Flagellar biosynthesis protein FliR 0.33 0.39
    19 Psyr_0718 type IV pilus assembly protein PilX 0.74 0.39
    20 Psyr_3487 flagellar protein FlgA 0.38 0.38

    Or look for negative cofitness