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  • Top cofit genes for Psyr_0663 from Pseudomonas syringae pv. syringae B728a

    nucleoside-binding protein
    SEED: Nucleoside ABC transporter, periplasmic nucleoside-binding protein
    KEGG: simple sugar transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_5013 L-carnitine dehydratase/bile acid-inducible protein F 0.48 0.51
    2 Psyr_1633 MotA/TolQ/ExbB proton channel 0.41 0.41
    3 Psyr_4121 transcriptional regulator, AraC family with amidase-like domain protein no 0.37
    4 Psyr_2133 Pseudouridine synthase no 0.36
    5 Psyr_3682 L-sorbosone dehydrogenase no 0.35
    6 Psyr_4113 LppC putative lipoprotein no 0.34
    7 Psyr_4498 outer membrane transport energization protein ExbD no 0.34
    8 Psyr_2667 Transposase Tn3 no 0.34
    9 Psyr_2672 Citrate transporter no 0.33
    10 Psyr_5006 HAD-superfamily hydrolase, subfamily IA, variant 3 0.28 0.33
    11 Psyr_4522 Catalase 0.45 0.32
    12 Psyr_4937 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.32
    13 Psyr_0839 Deoxyribose-phosphate aldolase no 0.31
    14 Psyr_1896 transcription-repair coupling factor 0.52 0.31
    15 Psyr_0898 TRAP dicarboxylate transporter, DctM subunit no 0.31
    16 Psyr_3712 conserved hypothetical protein no 0.31
    17 Psyr_3219 Peptidase M24 0.29 0.31
    18 Psyr_3449 Flagellar hook-length control protein 0.30 0.31
    19 Psyr_1759 extracellular solute-binding protein, family 5 no 0.31
    20 Psyr_4081 conserved hypothetical protein no 0.30

    Or look for negative cofitness