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  • Top cofit genes for Psyr_0589 from Pseudomonas syringae pv. syringae B728a

    protein of unknown function DUF403:Protein of unknown function DUF404:Protein of unknown function DUF407
    SEED: Protein containing domains DUF404, DUF407, DUF403

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1193 type III helper protein HrpZ1 no 0.46
    2 Psyr_3790 conserved hypothetical protein no 0.44
    3 Psyr_5106 NAD-dependent epimerase/dehydratase 0.46 0.41
    4 Psyr_3687 Protein of unknown function UPF0118 no 0.40
    5 Psyr_3684 NLP/P60 no 0.40
    6 Psyr_0057 conserved hypothetical protein no 0.39
    7 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.79 0.39
    8 Psyr_1793 Amino acid adenylation no 0.38
    9 Psyr_2481 thiol peroxidase (atypical 2-Cys peroxiredoxin) no 0.38
    10 Psyr_3024 Peptidase M14, carboxypeptidase A no 0.38
    11 Psyr_0477 Protein of unknown function UPF0001 0.45 0.38
    12 Psyr_2401 extracellular solute-binding protein, family 1 no 0.37
    13 Psyr_1340 Aminotransferase, class I and II 0.85 0.37
    14 Psyr_4801 Outer membrane efflux protein no 0.37
    15 Psyr_4615 Spermidine/putrescine ABC transporter ATP-binding subunit no 0.37
    16 Psyr_2778 Phage minor tail protein L no 0.37
    17 Psyr_1619 conserved hypothetical protein no 0.37
    18 Psyr_1960 Non-ribosomal peptide synthase:Amino acid adenylation no 0.36
    19 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase 0.53 0.36
    20 Psyr_4968 hypothetical protein no 0.36

    Or look for negative cofitness