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  • Top cofit genes for Psyr_0580 from Pseudomonas syringae pv. syringae B728a

    23S rRNA Gm-2251 2'-O-methyltransferase
    SEED: 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-)
    KEGG: RNA methyltransferase, TrmH family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0188 Protein of unknown function UPF0047 0.43 0.41
    2 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal 0.49 0.40
    3 Psyr_2232 Major facilitator superfamily 0.69 0.39
    4 Psyr_4683 dethiobiotin synthase 0.60 0.38
    5 Psyr_4686 8-amino-7-oxononanoate synthase 0.53 0.37
    6 Psyr_3581 ribosomal large subunit pseudouridine synthase B 0.27 0.37
    7 Psyr_2346 conserved hypothetical protein no 0.37
    8 Psyr_4203 SsrA-binding protein 0.60 0.37
    9 Psyr_1515 hypothetical protein no 0.36
    10 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.36
    11 Psyr_0574 protease FtsH subunit HflK 0.60 0.36
    12 Psyr_2899 conserved hypothetical protein no 0.36
    13 Psyr_0475 Protein of unknown function YGGT 0.59 0.36
    14 Psyr_4439 histidine kinase no 0.36
    15 Psyr_4932 agmatine deiminase 0.51 0.35
    16 Psyr_2601 regulatory protein, LuxR no 0.35
    17 Psyr_1474 hypothetical protein no 0.35
    18 Psyr_1667 Colicin V production protein no 0.35
    19 Psyr_0193 transcriptional regulator, AraC family no 0.35
    20 Psyr_2603 Secretion protein HlyD no 0.35

    Or look for negative cofitness