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  • Top cofit genes for Psyr_0578 from Pseudomonas syringae pv. syringae B728a

    Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer
    SEED: Methyl-accepting chemotaxis protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4666 transcriptional regulator, AsnC family 0.49 0.35
    2 Psyr_1169 nucleoside-binding protein no 0.35
    3 Psyr_3360 Major facilitator superfamily no 0.35
    4 Psyr_1959 Amino acid adenylation no 0.34
    5 Psyr_3176 camphor resistance protein CrcB 0.23 0.33
    6 Psyr_1447 conserved hypothetical protein no 0.32
    7 Psyr_3249 conserved hypothetical protein no 0.32
    8 Psyr_0428 Monooxygenase, FAD-binding protein no 0.31
    9 Psyr_0317 5-formyltetrahydrofolate cyclo-ligase no 0.31
    10 Psyr_0882 conserved hypothetical protein no 0.31
    11 Psyr_1691 hypothetical protein no 0.31
    12 Psyr_3715 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.44 0.31
    13 Psyr_3764 conserved hypothetical protein no 0.31
    14 Psyr_4063 Protein of unknown function DUF1111 no 0.30
    15 Psyr_1049 Short-chain dehydrogenase/reductase SDR no 0.30
    16 Psyr_2190 NADH:flavin oxidoreductase/NADH oxidase no 0.29
    17 Psyr_3184 ATP-dependent Clp protease adaptor protein ClpS 0.12 0.29
    18 Psyr_5013 L-carnitine dehydratase/bile acid-inducible protein F 0.18 0.29
    19 Psyr_3735 PAS no 0.29
    20 Psyr_2998 conserved hypothetical protein no 0.29

    Or look for negative cofitness