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  • Top cofit genes for Psyr_0545 from Pseudomonas syringae pv. syringae B728a

    Permease for cytosine/purines, uracil, thiamine, allantoin
    SEED: Predicted hydroxymethylpyrimidine transporter CytX
    KEGG: nucleobase:cation symporter-1, NCS1 family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0085 conserved hypothetical protein no 0.35
    2 Psyr_5103 Periplasmic binding protein no 0.34
    3 Psyr_2088 2-methylaconitate cis-trans isomerase no 0.32
    4 Psyr_0033 tryptophan synthase, alpha chain 0.17 0.29
    5 Psyr_2748 FAD dependent oxidoreductase no 0.29
    6 Psyr_2686 carbamate kinase 0.20 0.29
    7 Psyr_3095 transport system permease protein no 0.29
    8 Psyr_2974 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.64 0.28
    9 Psyr_4337 AMP nucleosidase 0.68 0.28
    10 Psyr_0034 tryptophan synthase, beta chain 0.19 0.28
    11 Psyr_1585 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.28
    12 Psyr_1933 hypothetical protein no 0.27
    13 Psyr_0453 16S rRNA m(3)U-1498 methyltransferase no 0.27
    14 Psyr_2872 hypothetical protein no 0.27
    15 Psyr_1914 transaldolase 0.70 0.27
    16 Psyr_4712 serine hydroxymethyltransferase no 0.27
    17 Psyr_2967 Secretion protein HlyD no 0.27
    18 Psyr_2592 transport system permease protein no 0.26
    19 Psyr_5062 transcriptional regulator, LysR family no 0.26
    20 Psyr_1655 TatD-related deoxyribonuclease no 0.26

    Or look for negative cofitness