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  • Top cofit genes for Psyr_0534 from Pseudomonas syringae pv. syringae B728a

    membrane protein, putative
    SEED: Oligosaccharide repeat unit polymerase Wzy; O-antigen ligase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.86 0.93
    2 Psyr_0914 Glycosyl transferase, group 1 0.83 0.92
    3 Psyr_3637 Glycosyl transferase, family 4 0.80 0.91
    4 Psyr_0936 Glycosyl transferase, group 1 0.82 0.90
    5 Psyr_0920 Glycosyl transferase, group 1 0.75 0.85
    6 Psyr_0916 GDP-mannose 4,6-dehydratase 0.84 0.82
    7 Psyr_0919 Chromosome segregation ATPase-like protein 0.66 0.82
    8 Psyr_0915 NAD-dependent epimerase/dehydratase 0.75 0.81
    9 Psyr_0533 conserved hypothetical protein 0.66 0.75
    10 Psyr_0219 phosphomannomutase 0.67 0.74
    11 Psyr_0531 LmbE-like protein no 0.72
    12 Psyr_0378 Glycosyl transferase, family 2 no 0.71
    13 Psyr_0532 conserved hypothetical protein 0.85 0.71
    14 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) 0.75 0.71
    15 Psyr_0377 Periplasmic glucan biosynthesis protein, MdoG no 0.70
    16 Psyr_4270 serine hydroxymethyltransferase no 0.64
    17 Psyr_0923 hypothetical protein 0.59 0.64
    18 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.65 0.63
    19 Psyr_4852 D-3-phosphoglycerate dehydrogenase no 0.63
    20 Psyr_0626 DedA 0.82 0.61

    Or look for negative cofitness