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  • Top cofit genes for Psyr_0527 from Pseudomonas syringae pv. syringae B728a

    type III effector HopAC1
    SEED: Aconitase A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily no 0.36
    2 Psyr_1583 cysteine synthase no 0.32
    3 Psyr_1185 type III chaperone protein ShcM no 0.31
    4 Psyr_3711 Dienelactone hydrolase no 0.31
    5 Psyr_4990 YD repeat protein no 0.31
    6 Psyr_4948 ATP-dependent DNA helicase, RecQ-like protein no 0.30
    7 Psyr_4506 Glycerophosphodiester phosphodiesterase no 0.29
    8 Psyr_3705 conserved hypothetical protein no 0.29
    9 Psyr_0599 amino acid/amide ABC transporter membrane protein 2, HAAT family 0.37 0.29
    10 Psyr_1342 methionine aminopeptidase, type I no 0.28
    11 Psyr_4211 extracellular solute-binding protein, family 5 no 0.28
    12 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase no 0.28
    13 Psyr_2027 epoxide hydrolase, Serine peptidase, MEROPS family S33 no 0.28
    14 Psyr_3163 epralysin, Metallo peptidase, MEROPS family M10B no 0.28
    15 Psyr_1303 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.28
    16 Psyr_4084 conserved hypothetical protein no 0.28
    17 Psyr_3590 conserved hypothetical protein no 0.28
    18 Psyr_3223 Glycosyl transferase, family 2 no 0.27
    19 Psyr_3578 Major facilitator superfamily no 0.27
    20 Psyr_0825 conserved hypothetical protein no 0.27

    Or look for negative cofitness