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Cofit
Protein
Homologs
Top cofit genes for Psyr_0527 from
Pseudomonas syringae pv. syringae B728a
type III effector HopAC1
SEED: Aconitase A
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1367
Zinc-containing alcohol dehydrogenase superfamily
no
0.36
2
Psyr
_1583
cysteine synthase
no
0.32
3
Psyr
_1185
type III chaperone protein ShcM
no
0.31
4
Psyr
_3711
Dienelactone hydrolase
no
0.31
5
Psyr
_4990
YD repeat protein
no
0.31
6
Psyr
_4948
ATP-dependent DNA helicase, RecQ-like protein
no
0.30
7
Psyr
_4506
Glycerophosphodiester phosphodiesterase
no
0.29
8
Psyr
_3705
conserved hypothetical protein
no
0.29
9
Psyr
_0599
amino acid/amide ABC transporter membrane protein 2, HAAT family
0.37
0.29
10
Psyr
_1342
methionine aminopeptidase, type I
no
0.28
11
Psyr
_4211
extracellular solute-binding protein, family 5
no
0.28
12
Psyr
_0857
[SSU ribosomal protein S18P]-alanine acetyltransferase
no
0.28
13
Psyr
_2027
epoxide hydrolase, Serine peptidase, MEROPS family S33
no
0.28
14
Psyr
_3163
epralysin, Metallo peptidase, MEROPS family M10B
no
0.28
15
Psyr
_1303
Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer
no
0.28
16
Psyr
_4084
conserved hypothetical protein
no
0.28
17
Psyr
_3590
conserved hypothetical protein
no
0.28
18
Psyr
_3223
Glycosyl transferase, family 2
no
0.27
19
Psyr
_3578
Major facilitator superfamily
no
0.27
20
Psyr
_0825
conserved hypothetical protein
no
0.27
Or look for
negative cofitness