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Cofit
Protein
Homologs
Top cofit genes for Psyr_0508 from
Pseudomonas syringae pv. syringae B728a
lyase, putative
SEED: lyase, putative
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1055
Membrane bound O-acyl transferase, MBOAT
0.80
0.83
2
Psyr
_1053
alginate biosynthesis protein AlgF
0.72
0.75
3
Psyr
_1054
alginate biosynthesis protein AlgJ
0.63
0.73
4
Psyr
_1395
virulence
0.76
0.71
5
Psyr
_1060
Sel1-like repeat protein
0.60
0.71
6
Psyr
_3150
type II secretion system protein
no
0.71
7
Psyr
_3141
type II and III secretion system protein:NolW-like protein
0.59
0.71
8
Psyr
_0915
NAD-dependent epimerase/dehydratase
0.64
0.70
9
Psyr
_0219
phosphomannomutase
0.67
0.68
10
Psyr
_0478
pilus retraction ATPase PilT
no
0.67
11
Psyr
_0758
beta-fructofuranosidase
0.78
0.67
12
Psyr
_4130
Peptidase S1, chymotrypsin:PDZ/DHR/GLGF
0.61
0.65
13
Psyr
_3958
RNA polymerase, sigma-24 subunit, RpoE
0.64
0.65
14
Psyr
_0796
type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A
0.67
0.64
15
Psyr
_1058
Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis
0.60
0.63
16
Psyr
_1062
alginate biosynthesis protein Alg8
0.57
0.62
17
Psyr
_4659
type III effector HopAB1
no
0.61
18
Psyr
_4770
diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
0.69
0.61
19
Psyr
_5053
asparaginase
0.74
0.61
20
Psyr
_1061
alginate biosynthesis protein Alg44
no
0.60
Or look for
negative cofitness