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  • Top cofit genes for Psyr_0508 from Pseudomonas syringae pv. syringae B728a

    lyase, putative
    SEED: lyase, putative

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.80 0.83
    2 Psyr_1053 alginate biosynthesis protein AlgF 0.72 0.75
    3 Psyr_1054 alginate biosynthesis protein AlgJ 0.63 0.73
    4 Psyr_1395 virulence 0.76 0.71
    5 Psyr_1060 Sel1-like repeat protein 0.60 0.71
    6 Psyr_3150 type II secretion system protein no 0.71
    7 Psyr_3141 type II and III secretion system protein:NolW-like protein 0.59 0.71
    8 Psyr_0915 NAD-dependent epimerase/dehydratase 0.64 0.70
    9 Psyr_0219 phosphomannomutase 0.67 0.68
    10 Psyr_0478 pilus retraction ATPase PilT no 0.67
    11 Psyr_0758 beta-fructofuranosidase 0.78 0.67
    12 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.61 0.65
    13 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.64 0.65
    14 Psyr_0796 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A 0.67 0.64
    15 Psyr_1058 Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis 0.60 0.63
    16 Psyr_1062 alginate biosynthesis protein Alg8 0.57 0.62
    17 Psyr_4659 type III effector HopAB1 no 0.61
    18 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 0.69 0.61
    19 Psyr_5053 asparaginase 0.74 0.61
    20 Psyr_1061 alginate biosynthesis protein Alg44 no 0.60

    Or look for negative cofitness