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  • Top cofit genes for Psyr_0472 from Pseudomonas syringae pv. syringae B728a

    Ham1-like protein
    SEED: Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15)
    KEGG: nucleoside-triphosphatase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2070 ErfK/YbiS/YcfS/YnhG 0.42 0.39
    2 Psyr_4801 Outer membrane efflux protein no 0.39
    3 Psyr_1716 conserved hypothetical protein 0.54 0.36
    4 Psyr_0546 lipoprotein, putative no 0.36
    5 Psyr_4224 conserved hypothetical protein no 0.35
    6 Psyr_2925 Helix-turn-helix motif protein no 0.35
    7 Psyr_3803 MscS Mechanosensitive ion channel 0.35 0.34
    8 Psyr_1752 transcriptional regulator, HxlR family no 0.34
    9 Psyr_1599 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A 0.53 0.34
    10 Psyr_1212 type III secretion protein HrpO no 0.34
    11 Psyr_4291 hypothetical protein no 0.34
    12 Psyr_0426 lipoprotein, putative no 0.34
    13 Psyr_1211 type III secretion protein HrpP no 0.33
    14 Psyr_4257 Uncharacterized protein UPF0114 no 0.33
    15 Psyr_1522 Single-strand binding protein no 0.33
    16 Psyr_2713 transcriptional regulator, LysR family 0.19 0.32
    17 Psyr_2212 Arginase/agmatinase/formiminoglutamase no 0.32
    18 Psyr_2501 Hemerythrin 0.35 0.32
    19 Psyr_3543 transcriptional regulator, AraC family no 0.32
    20 Psyr_1048 Secretion protein HlyD no 0.31

    Or look for negative cofitness