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  • Top cofit genes for Psyr_0468 from Pseudomonas syringae pv. syringae B728a

    Aminotransferase, class I and II
    SEED: Uncharacterized PLP-dependent aminotransferase YfdZ
    KEGG: alanine-synthesizing transaminase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2843 C-5 cytosine-specific DNA methylase no 0.44
    2 Psyr_3240 CTP synthase 0.20 0.38
    3 Psyr_3553 conserved hypothetical protein 0.50 0.38
    4 Psyr_0129 conserved hypothetical protein no 0.37
    5 Psyr_1323 Extensin-like, C-terminal no 0.37
    6 Psyr_1872 conserved hypothetical protein no 0.37
    7 Psyr_2059 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.37
    8 Psyr_3140 Phospholipase/Carboxylesterase no 0.37
    9 Psyr_1570 Copper resistance B precursor no 0.36
    10 Psyr_0485 Protein of unknown function DUF179 0.35 0.36
    11 Psyr_3188 transcriptional regulator, LysR family no 0.35
    12 Psyr_3158 FAD dependent oxidoreductase no 0.35
    13 Psyr_2604 conserved hypothetical protein; putative membrane protein no 0.35
    14 Psyr_2985 DNA-N1-methyladenine dioxygenase no 0.35
    15 Psyr_4824 ABC transporter, substrate-binding protein, aliphatic sulfonate no 0.35
    16 Psyr_1292 multi-sensor hybrid histidine kinase no 0.35
    17 Psyr_3243 TonB-dependent siderophore receptor no 0.34
    18 Psyr_0671 nucleoside ABC transporter membrane protein 0.49 0.34
    19 Psyr_3971 lipoprotein, putative no 0.34
    20 Psyr_0049 Cytochrome c, class I:Iron permease FTR1 no 0.33

    Or look for negative cofitness