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  • Top cofit genes for Psyr_0451 from Pseudomonas syringae pv. syringae B728a

    regulatory protein, LysR:LysR, substrate-binding protein
    SEED: Malonate utilization transcriptional regulator
    KEGG: LysR family transcriptional regulator, malonate utilization transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2945 transcriptional regulator, LysR family no 0.48
    2 Psyr_0174 Sodium:dicarboxylate symporter 0.37 0.44
    3 Psyr_0475 Protein of unknown function YGGT 0.41 0.43
    4 Psyr_0193 transcriptional regulator, AraC family no 0.43
    5 Psyr_4315 Asparagine synthase, glutamine-hydrolyzing 0.41 0.40
    6 Psyr_0340 ABC transporter, periplasmic substrate-binding protein 0.50 0.40
    7 Psyr_0263 Two-component response regulator AlgB no 0.39
    8 Psyr_3054 Choline/ethanolamine kinase:Aminoglycoside phosphotransferase no 0.39
    9 Psyr_2044 YD repeat protein no 0.39
    10 Psyr_3246 Ku 0.43 0.39
    11 Psyr_4203 SsrA-binding protein 0.41 0.38
    12 Psyr_1327 conserved hypothetical protein no 0.38
    13 Psyr_0188 Protein of unknown function UPF0047 no 0.38
    14 Psyr_3354 Ankyrin no 0.38
    15 Psyr_4872 conserved hypothetical protein 0.54 0.37
    16 Psyr_3665 conserved hypothetical protein no 0.37
    17 Psyr_0706 Acyltransferase 3 no 0.36
    18 Psyr_2899 conserved hypothetical protein no 0.36
    19 Psyr_2092 Protein of unknown function 1935 0.17 0.36
    20 Psyr_0195 conserved hypothetical protein no 0.36

    Or look for negative cofitness