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  • Top cofit genes for Psyr_0358 from Pseudomonas syringae pv. syringae B728a

    Diaminopimelate-binding protein / L-cystine-binding protein
    SEED: Cystine ABC transporter, periplasmic cystine-binding protein FliY
    KEGG: cystine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0492 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt no 0.39
    2 Psyr_2154 transcriptional regulator, LacI family 0.51 0.39
    3 Psyr_1183 type III effector HopAA1 no 0.38
    4 Psyr_3714 Ferric iron reductase no 0.36
    5 Psyr_4088 ketopantoate reductase 0.32 0.35
    6 Psyr_1186 type III effector HopM1 no 0.35
    7 Psyr_4798 conserved hypothetical protein 0.51 0.35
    8 Psyr_4243 Oxidoreductase FAD/NAD(P)-binding:PepSY-associated TM helix:Flavodoxin/nitric oxide synthase 0.21 0.35
    9 Psyr_1094 cold-shock DNA-binding protein family no 0.35
    10 Psyr_0355 conserved hypothetical protein no 0.34
    11 Psyr_0331 AMP-dependent synthetase and ligase 0.36 0.34
    12 Psyr_0343 hypothetical protein no 0.33
    13 Psyr_4248 hypothetical protein no 0.33
    14 Psyr_1204 hypothetical protein no 0.33
    15 Psyr_3367 Iron permease FTR1 no 0.33
    16 Psyr_4221 diguanylate cyclase/phosphodiesterase no 0.32
    17 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.32 0.32
    18 Psyr_3134 General substrate transporter:Major facilitator superfamily no 0.32
    19 Psyr_0739 CDS no 0.32
    20 Psyr_0400 nuclease (SNase-like) no 0.32

    Or look for negative cofitness