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  • Top cofit genes for Psyr_0266 from Pseudomonas syringae pv. syringae B728a

    GGDEF domain protein
    SEED: GGDEF domain protein
    KEGG: diguanylate cyclase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3843 diguanylate cyclase/phosphodiesterase no 0.44
    2 Psyr_1139 Response regulator receiver:CheW-like protein no 0.42
    3 Psyr_0074 diguanylate cyclase/phosphodiesterase no 0.41
    4 Psyr_0478 pilus retraction ATPase PilT 0.69 0.39
    5 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) 0.44 0.39
    6 Psyr_2679 Binding-protein-dependent transport systems inner membrane component no 0.38
    7 Psyr_0697 tRNA 2-selenouridine synthase no 0.38
    8 Psyr_4667 Tryptophan 2-monooxygenase no 0.36
    9 Psyr_2299 hypothetical protein no 0.36
    10 Psyr_4224 conserved hypothetical protein no 0.36
    11 Psyr_3143 general secretion pathway protein M, putative no 0.35
    12 Psyr_1557 NADH:flavin oxidoreductase/NADH oxidase no 0.35
    13 Psyr_3578 Major facilitator superfamily 0.59 0.35
    14 Psyr_0140 Binding-protein-dependent transport systems inner membrane component no 0.34
    15 Psyr_3004 transcriptional regulator, LysR family no 0.34
    16 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI no 0.34
    17 Psyr_1048 Secretion protein HlyD 0.75 0.33
    18 Psyr_0336 Outer membrane autotransporter barrel no 0.33
    19 Psyr_4209 PAC motif:Bacterial chemotaxis sensory transducer no 0.33
    20 Psyr_3704 conserved hypothetical protein no 0.33

    Or look for negative cofitness