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  • Top cofit genes for Psyr_0263 from Pseudomonas syringae pv. syringae B728a

    Two-component response regulator AlgB
    KEGG: two-component system, NtrC family, response regulator AlgB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3773 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal 0.27 0.49
    2 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.86 0.45
    3 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.72 0.44
    4 Psyr_2978 PAS 0.56 0.41
    5 Psyr_4683 dethiobiotin synthase 0.26 0.40
    6 Psyr_0451 regulatory protein, LysR:LysR, substrate-binding protein no 0.39
    7 Psyr_4341 thiamine-phosphate diphosphorylase 0.32 0.39
    8 Psyr_4025 ATPase no 0.38
    9 Psyr_3505 Heme oxygenase 0.43 0.38
    10 Psyr_4960 protein of unknown function DUF876 no 0.37
    11 Psyr_0571 tRNA isopentenyltransferase no 0.37
    12 Psyr_4203 SsrA-binding protein no 0.37
    13 Psyr_1700 Glycosyl hydrolase, BNR repeat protein 0.38 0.37
    14 Psyr_2194 Acriflavin resistance protein no 0.37
    15 Psyr_1435 transcriptional regulator, LysR family no 0.37
    16 Psyr_0193 transcriptional regulator, AraC family no 0.37
    17 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme no 0.37
    18 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) no 0.37
    19 Psyr_3354 Ankyrin 0.57 0.36
    20 Psyr_4439 histidine kinase no 0.36

    Or look for negative cofitness