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  • Top cofit genes for Psyr_0235 from Pseudomonas syringae pv. syringae B728a

    D-amino acid dehydrogenase small subunit
    SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
    KEGG: D-amino-acid dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3172 Glycosyl transferase, family 3 0.66 0.41
    2 Psyr_3301 Undecaprenyl-phosphate galactosephosphotransferase 0.29 0.40
    3 Psyr_2138 Glycosyl transferase, family 2 no 0.38
    4 Psyr_3443 Flagellar biosynthesis protein FliQ 0.22 0.38
    5 Psyr_2646 Radical SAM no 0.36
    6 Psyr_3735 PAS no 0.36
    7 Psyr_1013 hypothetical protein no 0.35
    8 Psyr_4871 hypothetical protein no 0.35
    9 Psyr_0215 Exodeoxyribonuclease III xth 0.50 0.35
    10 Psyr_4377 response regulator receiver modulated diguanylate cyclase no 0.35
    11 Psyr_1684 GGDEF domain protein no 0.34
    12 Psyr_3607 transcriptional regulator, LysR family 0.73 0.34
    13 Psyr_3447 Flagellar motor switch protein FliM 0.57 0.34
    14 Psyr_3304 Lipopolysaccharide biosynthesis no 0.34
    15 Psyr_2730 outer membrane porin no 0.33
    16 Psyr_1080 Excinuclease ABC, C subunit, N-terminal no 0.33
    17 Psyr_3342 conserved hypothetical protein no 0.33
    18 Psyr_4678 GGDEF domain protein no 0.33
    19 Psyr_4757 transcriptional regulator, TetR family 0.28 0.33
    20 Psyr_1522 Single-strand binding protein no 0.33

    Or look for negative cofitness