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  • Top cofit genes for Psyr_0215 from Pseudomonas syringae pv. syringae B728a

    Exodeoxyribonuclease III xth
    SEED: Exodeoxyribonuclease III (EC 3.1.11.2)
    KEGG: exodeoxyribonuclease III

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3443 Flagellar biosynthesis protein FliQ 0.34 0.56
    2 Psyr_3440 Flagellar biosynthesis protein FlhA 0.33 0.51
    3 Psyr_1684 GGDEF domain protein no 0.50
    4 Psyr_4678 GGDEF domain protein 0.69 0.49
    5 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE 0.37 0.48
    6 Psyr_3453 flagellar protein FliJ, putative 0.34 0.48
    7 Psyr_3301 Undecaprenyl-phosphate galactosephosphotransferase no 0.48
    8 Psyr_4206 GGDEF domain protein no 0.47
    9 Psyr_3447 Flagellar motor switch protein FliM 0.40 0.46
    10 Psyr_5043 Thioesterase superfamily 0.77 0.46
    11 Psyr_3454 ATPase FliI/YscN 0.30 0.46
    12 Psyr_3470 Flagellin, N-terminal 0.35 0.46
    13 Psyr_3461 Helix-turn-helix, Fis-type 0.41 0.45
    14 Psyr_3956 sigma E regulatory protein, MucB/RseB 0.46 0.44
    15 Psyr_0402 Peptidoglycan glycosyltransferase 0.46 0.44
    16 Psyr_3304 Lipopolysaccharide biosynthesis no 0.44
    17 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase 0.36 0.43
    18 Psyr_1921 Alpha/beta hydrolase fold protein no 0.43
    19 Psyr_3487 flagellar protein FlgA 0.35 0.43
    20 Psyr_2848 hypothetical protein no 0.43

    Or look for negative cofitness