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  • Top cofit genes for Psyr_0198 from Pseudomonas syringae pv. syringae B728a

    Citrate transporter
    SEED: Uncharacterized transporter, similarity to citrate transporter
    KEGG: citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3965 Response regulator receiver:Transcriptional regulatory protein, C-terminal 0.99 0.79
    2 Psyr_0667 Periplasmic binding protein no 0.77
    3 Psyr_3966 Uncharacterized protein UPF0065 0.98 0.70
    4 Psyr_0665 transport system permease protein no 0.68
    5 Psyr_3964 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal 0.99 0.67
    6 Psyr_1038 TonB-dependent siderophore receptor 0.76 0.64
    7 Psyr_0664 ABC transporter no 0.62
    8 Psyr_1899 General substrate transporter:Major facilitator superfamily 0.60 0.61
    9 Psyr_0666 transport system permease protein no 0.50
    10 Psyr_0811 Integral membrane protein TerC no 0.44
    11 Psyr_1040 RNA polymerase sigma factor, ECF subfamily 0.41 0.44
    12 Psyr_0809 stress protein no 0.41
    13 Psyr_0812 stress protein no 0.38
    14 Psyr_4113 LppC putative lipoprotein no 0.37
    15 Psyr_0937 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) no 0.35
    16 Psyr_3564 arginine succinyltransferase 0.69 0.35
    17 Psyr_3262 dnaK suppressor protein, putative no 0.34
    18 Psyr_1898 Major facilitator superfamily no 0.33
    19 Psyr_2739 ThiJ/PfpI no 0.33
    20 Psyr_3917 transcriptional regulator, LysR family 0.86 0.33

    Or look for negative cofitness