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  • Top cofit genes for Psyr_0173 from Pseudomonas syringae pv. syringae B728a

    SSU ribosomal protein S6P modification protein
    SEED: Ribosomal protein S6 glutaminyl transferase
    KEGG: ribosomal protein S6 modification protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4700 malate synthase 0.68 0.52
    2 Psyr_0830 Poly(A) polymerase 0.33 0.52
    3 Psyr_2324 conserved hypothetical protein no 0.50
    4 Psyr_0969 uracil phosphoribosyltransferase no 0.48
    5 Psyr_0859 Carbonate dehydratase no 0.47
    6 Psyr_2127 outer membrane porin no 0.46
    7 Psyr_3572 acetyl-coenzyme A synthetase 0.76 0.46
    8 Psyr_3695 RelA/SpoT protein 0.64 0.46
    9 Psyr_3874 amino acid ABC transporter substrate-binding protein, PAAT family 0.43 0.46
    10 Psyr_0648 transporter, putative no 0.43
    11 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.46 0.43
    12 Psyr_0824 acetyl-CoA acetyltransferase no 0.42
    13 Psyr_3026 transcriptional regulator, TetR family no 0.41
    14 Psyr_1610 ribosomal large subunit pseudouridine synthase A 0.21 0.41
    15 Psyr_3238 3-oxoacid CoA-transferase no 0.41
    16 Psyr_1498 Heavy metal sensor kinase no 0.40
    17 Psyr_3211 ATP-binding region, ATPase-like:Histidine kinase, HAMP region no 0.40
    18 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region 0.55 0.40
    19 Psyr_1530 hypothetical protein no 0.40
    20 Psyr_1280 Cytochrome c assembly protein no 0.40

    Or look for negative cofitness