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  • Top cofit genes for Psyr_0141 from Pseudomonas syringae pv. syringae B728a

    Binding-protein-dependent transport systems inner membrane component
    SEED: Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)
    KEGG: microcin C transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4160 Maf-like protein no 0.50
    2 Psyr_1272 NUDIX hydrolase no 0.48
    3 Psyr_1265 hypothetical protein no 0.46
    4 Psyr_4807 outer membrane porin no 0.46
    5 Psyr_2906 Pilus retraction protein PilT no 0.46
    6 Psyr_2083 Protein of unknown function DUF785 no 0.46
    7 Psyr_2563 HAD-superfamily hydrolase, subfamily IIA no 0.44
    8 Psyr_1895 conserved hypothetical protein no 0.44
    9 Psyr_5114 hypothetical protein no 0.44
    10 Psyr_1077 Isoflavone reductase no 0.44
    11 Psyr_2055 Transglutaminase-like protein no 0.44
    12 Psyr_3319 ThiJ/PfpI no 0.43
    13 Psyr_4480 outer membrane transport energization protein TonB no 0.42
    14 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein no 0.42
    15 Psyr_3748 GCN5-related N-acetyltransferase no 0.42
    16 Psyr_4131 Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902 no 0.42
    17 Psyr_0104 hypothetical protein no 0.41
    18 Psyr_2267 extracellular solute-binding protein, family 5 no 0.41
    19 Psyr_0803 conserved hypothetical protein no 0.41
    20 Psyr_2892 TonB-dependent receptor:TonB-dependent receptor no 0.41

    Or look for negative cofitness