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  • Top cofit genes for Psyr_0139 from Pseudomonas syringae pv. syringae B728a

    extracellular solute-binding protein, family 5
    SEED: ABC transporter, periplasmic substrate-binding protein
    KEGG: microcin C transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0616 conserved domain protein no 0.34
    2 Psyr_4324 serine O-acetyltransferase no 0.32
    3 Psyr_2079 phosphoserine phosphatase / phosphoserine:homoserine phosphotransferase no 0.30
    4 Psyr_3131 Secretion protein HlyD no 0.30
    5 Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) no 0.30
    6 Psyr_2797 hypothetical protein no 0.29
    7 Psyr_1667 Colicin V production protein no 0.28
    8 Psyr_1615 Patatin no 0.28
    9 Psyr_4412 conserved hypothetical protein no 0.28
    10 Psyr_3971 lipoprotein, putative no 0.27
    11 Psyr_3508 Glycosyl hydrolase, BNR repeat protein no 0.27
    12 Psyr_1154 Copper/Zinc superoxide dismutase no 0.27
    13 Psyr_3322 Major facilitator superfamily no 0.27
    14 Psyr_3871 Penicillin amidase no 0.26
    15 Psyr_3336 transcriptional regulator, LacI family no 0.26
    16 Psyr_3253 multisubunit potassium/proton antiporter, PhaC subunit no 0.26
    17 Psyr_0580 23S rRNA Gm-2251 2'-O-methyltransferase no 0.26
    18 Psyr_2652 hypothetical protein no 0.26
    19 Psyr_0844 Protein of unknown function DUF446 no 0.26
    20 Psyr_4386 conserved hypothetical protein no 0.26

    Or look for negative cofitness