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  • Top cofit genes for Psyr_0133 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, AsnC family
    SEED: Transcriptional regulator, AsnC family
    KEGG: Lrp/AsnC family transcriptional regulator

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3310 transferase hexapeptide repeat protein no 0.40
    2 Psyr_4911 amino acid ABC transporter ATP-binding protein, PAAT family 0.38 0.39
    3 Psyr_0835 transcriptional regulator, TraR/DksA family 0.41 0.39
    4 Psyr_1747 ATP-dependent Clp protease proteolytic subunit ClpP 0.23 0.38
    5 Psyr_3773 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.37
    6 Psyr_0955 membrane protein, putative no 0.37
    7 Psyr_0199 Glutathione-dependent formaldehyde-activating, GFA no 0.36
    8 Psyr_3876 amino acid ABC transporter membrane protein 2, PAAT family no 0.36
    9 Psyr_3418 PilT protein, N-terminal no 0.36
    10 Psyr_3274 5-dehydro-2-deoxygluconokinase no 0.36
    11 Psyr_0246 aminomethyltransferase no 0.36
    12 Psyr_0312 hypothetical protein no 0.36
    13 Psyr_3193 Transcription factor jumonji, jmjC 0.26 0.35
    14 Psyr_4259 ATP-dependent protease, putative no 0.35
    15 Psyr_4091 8-oxo-dGTPase no 0.34
    16 Psyr_4921 hypothetical protein no 0.34
    17 Psyr_2614 Amino acid adenylation 0.42 0.34
    18 Psyr_0134 Aminotransferase, class V 0.13 0.34
    19 Psyr_4341 thiamine-phosphate diphosphorylase 0.42 0.33
    20 Psyr_1483 hypothetical protein no 0.33

    Or look for negative cofitness