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Gene
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Cofit
Protein
Homologs
Top cofit genes for Psyr_0095 from
Pseudomonas syringae pv. syringae B728a
transposase, IS4 family
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1048
Secretion protein HlyD
no
0.43
2
Psyr
_3843
diguanylate cyclase/phosphodiesterase
no
0.42
3
Psyr
_0007
Aliphatic nitrilase
no
0.41
4
Psyr
_4954
Protein of unknown function DUF877
0.23
0.40
5
Psyr
_4450
transcriptional regulator, TetR family
0.63
0.40
6
Psyr
_1211
type III secretion protein HrpP
no
0.39
7
Psyr
_2032
two component transcriptional regulator, winged helix family
no
0.39
8
Psyr
_1342
methionine aminopeptidase, type I
no
0.39
9
Psyr
_3761
conserved hypothetical protein
no
0.39
10
Psyr
_4224
conserved hypothetical protein
no
0.38
11
Psyr
_1197
type III secretion protein HrpE
no
0.38
12
Psyr
_3076
Type I secretion system ATPase, HlyB
no
0.38
13
Psyr
_5007
Aldo/keto reductase
no
0.37
14
Psyr
_3483
Cyanase
no
0.37
15
Psyr
_1377
CinA, C-terminal
0.30
0.37
16
Psyr
_0595
Nicotinate phosphoribosyltransferase
no
0.36
17
Psyr
_0478
pilus retraction ATPase PilT
no
0.36
18
Psyr
_0288
Carbonate dehydratase
no
0.36
19
Psyr
_1202
negative regulator of hrp expression HrpV
no
0.36
20
Psyr
_2277
ammonium transporter
no
0.36
Or look for
negative cofitness