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  • Top cofit genes for Psyr_0095 from Pseudomonas syringae pv. syringae B728a

    transposase, IS4 family
    SEED: Mobile element protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1048 Secretion protein HlyD no 0.43
    2 Psyr_3843 diguanylate cyclase/phosphodiesterase no 0.42
    3 Psyr_0007 Aliphatic nitrilase no 0.41
    4 Psyr_4954 Protein of unknown function DUF877 0.23 0.40
    5 Psyr_4450 transcriptional regulator, TetR family 0.63 0.40
    6 Psyr_1211 type III secretion protein HrpP no 0.39
    7 Psyr_2032 two component transcriptional regulator, winged helix family no 0.39
    8 Psyr_1342 methionine aminopeptidase, type I no 0.39
    9 Psyr_3761 conserved hypothetical protein no 0.39
    10 Psyr_4224 conserved hypothetical protein no 0.38
    11 Psyr_1197 type III secretion protein HrpE no 0.38
    12 Psyr_3076 Type I secretion system ATPase, HlyB no 0.38
    13 Psyr_5007 Aldo/keto reductase no 0.37
    14 Psyr_3483 Cyanase no 0.37
    15 Psyr_1377 CinA, C-terminal 0.30 0.37
    16 Psyr_0595 Nicotinate phosphoribosyltransferase no 0.36
    17 Psyr_0478 pilus retraction ATPase PilT no 0.36
    18 Psyr_0288 Carbonate dehydratase no 0.36
    19 Psyr_1202 negative regulator of hrp expression HrpV no 0.36
    20 Psyr_2277 ammonium transporter no 0.36

    Or look for negative cofitness