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Cofit
Protein
Homologs
Top cofit genes for Psyr_0088 from
Pseudomonas syringae pv. syringae B728a
PAS:GGDEF
SEED: Sensory box/GGDEF family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1792
Amino acid adenylation
no
0.50
2
Psyr
_3049
Pirin, N-terminal
no
0.48
3
Psyr
_4298
Protein of unknown function DUF6
no
0.47
4
Psyr
_0835
transcriptional regulator, TraR/DksA family
no
0.47
5
Psyr
_0094
hypothetical protein
no
0.47
6
Psyr
_2124
Benzoate transport
no
0.47
7
Psyr
_2261
Peptidase M20:Peptidase M20
0.36
0.46
8
Psyr
_1500
GCN5-related N-acetyltransferase
no
0.46
9
Psyr
_1465
conserved hypothetical protein
no
0.46
10
Psyr
_1041
transcriptional regulator, AraC family
no
0.45
11
Psyr
_2952
NADP oxidoreductase, coenzyme F420-dependent
no
0.45
12
Psyr
_2767
Glycoside hydrolase, family 19
no
0.43
13
Psyr
_3111
transcriptional regulator, LysR family
no
0.43
14
Psyr
_0726
ribosomal large subunit pseudouridine synthase D
0.38
0.43
15
Psyr
_3969
Putative ammonia monooxygenase
no
0.43
16
Psyr
_3873
ATP-dependent DNA ligase:ATP-dependent DNA ligase
no
0.43
17
Psyr
_1816
transcriptional regulator, GntR family
no
0.43
18
Psyr
_2358
acetylornithine aminotransferase apoenzyme
no
0.43
19
Psyr
_0449
Malonate transporter MadL subunit
no
0.42
20
Psyr
_1755
ABC transporter
no
0.42
Or look for
negative cofitness