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  • Top cofit genes for Psyr_0063 from Pseudomonas syringae pv. syringae B728a

    Two-component response regulator AlgR
    SEED: Autolysis response regulater LytR
    KEGG: two-component system, LytT family, response regulator AlgR

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0459 5,10-methylenetetrahydrofolate reductase 0.62 0.49
    2 Psyr_4006 transcriptional regulator, TetR family 0.63 0.49
    3 Psyr_4605 transcriptional regulator PrtN, putative no 0.48
    4 Psyr_0914 Glycosyl transferase, group 1 0.69 0.42
    5 Psyr_0626 DedA 0.58 0.42
    6 Psyr_4630 thiosulfate sulfurtransferase no 0.41
    7 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.70 0.40
    8 Psyr_3196 isocitrate lyase 0.37 0.40
    9 Psyr_4602 hypothetical protein no 0.40
    10 Psyr_0920 Glycosyl transferase, group 1 0.61 0.40
    11 Psyr_2793 hypothetical protein no 0.40
    12 Psyr_0915 NAD-dependent epimerase/dehydratase 0.60 0.39
    13 Psyr_4583 Glycoside hydrolase, family 19 no 0.39
    14 Psyr_2828 C-5 cytosine-specific DNA methylase 0.46 0.39
    15 Psyr_0533 conserved hypothetical protein no 0.39
    16 Psyr_2146 methionine aminopeptidase, type I no 0.39
    17 Psyr_0293 Polyphosphate kinase 0.61 0.39
    18 Psyr_2835 hypothetical protein no 0.38
    19 Psyr_1690 Peptidase M1, membrane alanine aminopeptidase 0.61 0.38
    20 Psyr_3636 Polysaccharide biosynthesis protein CapD 0.88 0.38

    Or look for negative cofitness