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  • Top cofit genes for Psyr_0054 from Pseudomonas syringae pv. syringae B728a

    alginate regulatory protein AlgR3
    SEED: Twin-arginine translocation protein TatB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4822 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) no 0.43
    2 Psyr_4584 Protein of unknown function DUF144 no 0.42
    3 Psyr_4587 Baseplate J-like protein no 0.38
    4 Psyr_2229 TonB-dependent siderophore receptor no 0.38
    5 Psyr_4229 ABC transporter:ABC transporter, N-terminal no 0.37
    6 Psyr_2656 hypothetical protein no 0.37
    7 Psyr_4585 hypothetical protein no 0.37
    8 Psyr_2071 outer membrane lipoprotein OprI no 0.37
    9 Psyr_1012 Glycosyl transferase, group 1 no 0.35
    10 Psyr_0778 type III effector HopAG1 no 0.34
    11 Psyr_4290 conserved domain protein no 0.34
    12 Psyr_1504 transcriptional regulator, ArsR family no 0.34
    13 Psyr_0910 transcriptional regulator, AraC family no 0.34
    14 Psyr_2769 conserved hypothetical protein no 0.34
    15 Psyr_1572 HNH endonuclease no 0.33
    16 Psyr_3189 NUDIX hydrolase no 0.33
    17 Psyr_0196 conserved hypothetical protein no 0.33
    18 Psyr_0339 Binding-protein-dependent transport systems inner membrane component no 0.32
    19 Psyr_4805 YD repeat protein no 0.32
    20 Psyr_0817 N-acetylmuramoyl-L-alanine amidase, family 2 no 0.32

    Or look for negative cofitness