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  • Top cofit genes for Psyr_0045 from Pseudomonas syringae pv. syringae B728a

    oligopeptidase A, Metallo peptidase, MEROPS family M03A
    SEED: Oligopeptidase A (EC 3.4.24.70)
    KEGG: oligopeptidase A

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0089 Response regulator receiver no 0.44
    2 Psyr_0073 Multi antimicrobial extrusion protein MatE 0.66 0.44
    3 Psyr_3622 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase 0.56 0.40
    4 Psyr_1188 type III effector protein AvrE1 no 0.40
    5 Psyr_1442 conserved hypothetical protein no 0.39
    6 Psyr_4477 MscS Mechanosensitive ion channel no 0.38
    7 Psyr_2781 hypothetical protein no 0.37
    8 Psyr_3595 Metallophosphoesterase 0.44 0.36
    9 Psyr_3744 Protein of unknown function DUF214 0.55 0.35
    10 Psyr_3542 Short-chain dehydrogenase/reductase SDR no 0.35
    11 Psyr_1082 Glutaredoxin 0.61 0.34
    12 Psyr_3025 Major facilitator superfamily no 0.34
    13 Psyr_0006 putative phenylacetaldoxime dehydratase no 0.33
    14 Psyr_1187 type III chaperone protein ShcE no 0.33
    15 Psyr_3585 Sua5/YciO/YrdC/YwlC 0.32 0.33
    16 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.89 0.32
    17 Psyr_0255 glutamate-cysteine ligase 0.87 0.32
    18 Psyr_1183 type III effector HopAA1 0.46 0.32
    19 Psyr_0504 conserved domain protein no 0.32
    20 Psyr_4424 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix 0.65 0.31

    Or look for negative cofitness