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  • Top cofit genes for Psyr_0030 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3544 putative integral membrane protein no 0.41
    2 Psyr_1982 transcriptional regulator, LysR family 0.43 0.37
    3 Psyr_3139 conserved hypothetical protein 0.32 0.37
    4 Psyr_3329 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) no 0.37
    5 Psyr_0027 conserved hypothetical protein no 0.37
    6 Psyr_5061 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase no 0.36
    7 Psyr_1712 conserved hypothetical protein no 0.35
    8 Psyr_4064 lipoprotein, putative no 0.34
    9 Psyr_4213 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal no 0.33
    10 Psyr_2281 GGDEF domain protein no 0.33
    11 Psyr_2462 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region 0.67 0.32
    12 Psyr_0037 Protein of unknown function DUF1458 no 0.32
    13 Psyr_5060 Oxaloacetate decarboxylase, alpha subunit no 0.32
    14 Psyr_0423 3-oxoacyl-(acyl-carrier-protein) reductase, putative 0.31 0.32
    15 Psyr_1701 membrane protein, putative no 0.31
    16 Psyr_4091 8-oxo-dGTPase no 0.31
    17 Psyr_4964 OmpA/MotB no 0.31
    18 Psyr_1864 spermidine synthase no 0.31
    19 Psyr_3547 transcriptional regulator, TetR family no 0.30
    20 Psyr_3602 Rhodanese-like protein no 0.30

    Or look for negative cofitness