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  • Top cofit genes for Psyr_0025 from Pseudomonas syringae pv. syringae B728a

    shikimate dehydrogenase
    SEED: Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
    KEGG: shikimate dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4018 Formyltetrahydrofolate deformylase 0.44 0.75
    2 Psyr_4852 D-3-phosphoglycerate dehydrogenase 0.95 0.73
    3 Psyr_4609 anthranilate synthase, component I 0.97 0.72
    4 Psyr_0704 glutamate 5-kinase 0.93 0.71
    5 Psyr_1669 O-succinylhomoserine sulfhydrylase 0.96 0.70
    6 Psyr_0557 phosphoserine phosphatase 0.79 0.69
    7 Psyr_4369 glutamate-5-semialdehyde dehydrogenase 0.97 0.69
    8 Psyr_1985 3-isopropylmalate dehydrogenase 0.96 0.69
    9 Psyr_4270 serine hydroxymethyltransferase 0.96 0.68
    10 Psyr_0474 homoserine O-acetyltransferase 0.92 0.68
    11 Psyr_0473 Methionine biosynthesis MetW 0.91 0.67
    12 Psyr_0848 ketol-acid reductoisomerase 0.97 0.67
    13 Psyr_1983 3-isopropylmalate dehydratase, large subunit 0.97 0.66
    14 Psyr_0469 dihydroxyacid dehydratase 0.95 0.66
    15 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.94 0.66
    16 Psyr_3174 uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase 0.97 0.65
    17 Psyr_0915 NAD-dependent epimerase/dehydratase 0.66 0.64
    18 Psyr_4898 aromatic amino acid aminotransferase apoenzyme 0.74 0.63
    19 Psyr_0377 Periplasmic glucan biosynthesis protein, MdoG no 0.63
    20 Psyr_0846 acetolactate synthase, large subunit 0.98 0.63

    Or look for negative cofitness