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  • Top cofit genes for Psyr_0015 from Pseudomonas syringae pv. syringae B728a

    Oxidoreductase alpha (molybdopterin) subunit
    SEED: Anaerobic dehydrogenases, typically selenocysteine-containing
    KEGG: formate dehydrogenase, alpha subunit

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2000 transcriptional regulator, GntR family no 0.38
    2 Psyr_0025 shikimate dehydrogenase no 0.37
    3 Psyr_1721 moxR protein, putative no 0.37
    4 Psyr_4383 esterase/lipase/thioesterase family protein 0.26 0.37
    5 Psyr_4297 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal no 0.36
    6 Psyr_1489 hypothetical protein no 0.36
    7 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B no 0.35
    8 Psyr_0704 glutamate 5-kinase no 0.34
    9 Psyr_4572 Short-chain dehydrogenase/reductase SDR no 0.34
    10 Psyr_1210 type III secretion protein HrcQa no 0.34
    11 Psyr_2046 conserved hypothetical protein no 0.34
    12 Psyr_4609 anthranilate synthase, component I 0.42 0.34
    13 Psyr_0576 ATP phosphoribosyltransferase regulatory subunit, putative 0.41 0.33
    14 Psyr_1984 3-isopropylmalate dehydratase, small subunit 0.45 0.33
    15 Psyr_4269 type III effector HopAE1 no 0.33
    16 Psyr_0619 WavE lipopolysaccharide synthesis no 0.33
    17 Psyr_0064 Sensory transduction protein kinase AlgZ no 0.33
    18 Psyr_1197 type III secretion protein HrpE no 0.33
    19 Psyr_4580 anthranilate phosphoribosyltransferase 0.40 0.33
    20 Psyr_1720 Protein of unknown function DUF58 no 0.33

    Or look for negative cofitness