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  • Top cofit genes for Pf6N2E2_972 from Pseudomonas fluorescens FW300-N2E2

    DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
    SEED: DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster
    KEGG: DNA topoisomerase III

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_594 FMN reductase, NADPH-dependent no 0.29
    2 Pf6N2E2_1679 SUGAR TRANSPORTER no 0.28
    3 Pf6N2E2_2788 Transcriptional regulator, AsnC family no 0.27
    4 Pf6N2E2_959 putative membrane protein no 0.26
    5 Pf6N2E2_2406 Periplasmic binding protein no 0.26
    6 Pf6N2E2_3037 RNA polymerase sigma factor RpoS 0.82 0.25
    7 Pf6N2E2_4001 Cytochrome c family protein no 0.25
    8 Pf6N2E2_1251 Similar to non-heme chloroperoxidase, sll5080 homolog no 0.25
    9 Pf6N2E2_6051 Transcriptional regulator, LysR family no 0.25
    10 Pf6N2E2_4663 Alginate lyase precursor (EC 4.2.2.3) no 0.25
    11 Pf6N2E2_402 Carbonic anhydrase (EC 4.2.1.1) no 0.25
    12 Pf6N2E2_3294 hypothetical protein no 0.25
    13 Pf6N2E2_5288 hypothetical protein no 0.25
    14 Pf6N2E2_386 similar to ribulose-1,5-bisphosphate carboxylase, Type III no 0.25
    15 Pf6N2E2_761 Hemolysin-type calcium-binding region no 0.24
    16 Pf6N2E2_848 hypothetical protein no 0.24
    17 Pf6N2E2_3830 Glutaredoxin 3 (Grx3) 0.54 0.24
    18 Pf6N2E2_4990 Uncharacterized protein, similar to the N-terminal domain of Lon protease no 0.24
    19 Pf6N2E2_3867 hypothetical protein no 0.24
    20 Pf6N2E2_6052 Hydantoin racemase (EC 5.1.99.-) no 0.23

    Or look for negative cofitness