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  • Top cofit genes for Pf6N2E2_948 from Pseudomonas fluorescens FW300-N2E2

    Multidrug efflux transporter MexF
    SEED: Multidrug efflux transporter MexF

    Rank Hit Name Description Conserved? Cofitness  
    1 Pf6N2E2_4084 Transcriptional regulator no 0.25
    2 Pf6N2E2_1423 Gamma-aminobutyrate permease no 0.22
    3 Pf6N2E2_4975 Histone acetyltransferase HPA2 and related acetyltransferases no 0.22
    4 Pf6N2E2_592 Transcriptional regulators, LysR family no 0.21
    5 Pf6N2E2_4371 hypothetical protein no 0.21
    6 Pf6N2E2_122 Tyrosine-protein kinase Wzc (EC 2.7.10.2) no 0.20
    7 Pf6N2E2_1259 Isochorismatase (EC 3.3.2.1) no 0.20
    8 Pf6N2E2_3978 Type I secretion system, membrane fusion protein LapC no 0.20
    9 Pf6N2E2_3981 T1SS secreted agglutinin RTX no 0.20
    10 Pf6N2E2_3983 Membrane bound c-di-GMP receptor LapD no 0.20
    11 Pf6N2E2_4148 Glutamate-aspartate carrier protein no 0.19
    12 Pf6N2E2_2175 Transcriptional regulator, RpiR family no 0.19
    13 Pf6N2E2_5632 Aromatic amino acid transport protein AroP no 0.19
    14 Pf6N2E2_1793 Inositol transport system sugar-binding protein no 0.19
    15 Pf6N2E2_3979 Type I secretion system ATPase, LssB family LapB 0.56 0.19
    16 Pf6N2E2_5379 alginate biosynthesis protein AlgJ no 0.18
    17 Pf6N2E2_4773 Coenzyme PQQ synthesis protein D no 0.18
    18 Pf6N2E2_139 Two-component response regulator 0.25 0.18
    19 Pf6N2E2_3867 hypothetical protein no 0.18
    20 Pf6N2E2_3705 Putative sugar transporter no 0.18

    Or look for negative cofitness