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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_907 from
Pseudomonas fluorescens FW300-N2E2
Mobile element protein
SEED: Mobile element protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_5457
Membrane carboxypeptidase (penicillin-binding protein)
no
0.30
2
Pf6N2E2
_5191
Conserved domain protein
no
0.27
3
Pf6N2E2
_1603
hypothetical protein
no
0.26
4
Pf6N2E2
_4508
Transcriptional regulator, TetR family
no
0.25
5
Pf6N2E2
_4312
Serine/threonine protein kinase (EC 2.7.11.1)
no
0.25
6
Pf6N2E2
_5500
MoxR-like ATPases
no
0.25
7
Pf6N2E2
_4293
Lipase family protein
no
0.25
8
Pf6N2E2
_3828
tRNA (cytidine(34)-2'-O)-methyltransferase (EC 2.1.1.207)
no
0.25
9
Pf6N2E2
_4471
ABC-type multidrug transport system, permease component
no
0.24
10
Pf6N2E2
_4799
ycgB component of nitrogen-related signalling system (of yeaGH-ycgB)
(from data)
no
0.24
11
Pf6N2E2
_6065
ABC transporter in pyoverdin gene cluster, periplasmic component
no
0.24
12
Pf6N2E2
_4288
Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)
no
0.24
13
Pf6N2E2
_4472
ABC-type multidrug transport system, permease component
no
0.24
14
Pf6N2E2
_4801
yeaG component of nitrogen-related signalling system (of yeaGH-ycgB)
(from data)
no
0.24
15
Pf6N2E2
_5274
FolM Alternative dihydrofolate reductase 1
no
0.24
16
Pf6N2E2
_4036
Glutaryl-CoA dehydrogenase (EC 1.3.99.7)
no
0.24
17
Pf6N2E2
_4735
Ribosomal protein S6 glutaminyl transferase
0.16
0.24
18
Pf6N2E2
_952
putative exported protein
no
0.24
19
Pf6N2E2
_1554
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
no
0.23
20
Pf6N2E2
_416
Positive regulator of CheA protein activity (CheW)
no
0.23
Or look for
negative cofitness