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Cofit
Protein
Homologs
Top cofit genes for Pf6N2E2_888 from
Pseudomonas fluorescens FW300-N2E2
Enoyl-CoA hydratase (EC 4.2.1.17)
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Pf6N2E2
_1093
Transcriptional regulatory protein
no
0.31
2
Pf6N2E2
_3836
Putative periplasmic protein YibQ, distant homology with nucleoside diphosphatase and polysaccharide deacetylase
no
0.28
3
Pf6N2E2
_2764
Tricarboxylate transport sensor protein TctE
no
0.26
4
Pf6N2E2
_2768
Tricarboxylate transport protein TctC
no
0.23
5
Pf6N2E2
_5276
Transcriptional regulator, MerR family
no
0.22
6
Pf6N2E2
_1581
Type I secretion outer membrane protein, TolC precursor
no
0.21
7
Pf6N2E2
_5620
P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein
no
0.21
8
Pf6N2E2
_1035
MotA/TolQ/ExbB proton channel family protein
no
0.21
9
Pf6N2E2
_29
Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily
no
0.21
10
Pf6N2E2
_5501
FIG00955538: hypothetical protein
no
0.20
11
Pf6N2E2
_3418
Putative large exoprotein involved in heme utilization or adhesion of ShlA/HecA/FhaA family
no
0.20
12
Pf6N2E2
_3413
Fe2+-dicitrate sensor, membrane component
no
0.20
13
Pf6N2E2
_198
hypothetical protein
no
0.20
14
Pf6N2E2
_3062
Membrane-associated zinc metalloprotease
no
0.20
15
Pf6N2E2
_1160
Tricarboxylate porin OpdH
no
0.20
16
Pf6N2E2
_184
Urea ABC transporter, permease protein UrtB
no
0.20
17
Pf6N2E2
_1228
Lipase (EC 3.1.1.3)
no
0.20
18
Pf6N2E2
_3922
FIG00957011: hypothetical protein
no
0.20
19
Pf6N2E2
_437
Alkylated DNA repair protein AlkB
no
0.19
20
Pf6N2E2
_354
Type III PLP / low-specificity D-threonine aldolase
no
0.19
Or look for
negative cofitness